Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVPNKQSQNVQNHRPYGGVVPQGMTQAQYTELEKTLPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHALPLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQDHMNQNTHMNQQPQIQQGHMQSSNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRSTNK |
| 1A93 Chain:A ((1-32)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGVQAEEQKLISEEDLLRKRREQLKHKLEQL------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A93.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5724 for 127 contacts (45.1/contact) +
2D Compatibility (PS) -3263 + (NN) 337 + (LL) 12068
1D Compatibility (HY) -2400 + (ID) 200
Total energy: 12266.0 ( 96.58 by residue)
QMean score : -0.015
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