Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSTPHIKPMNDVEIAETVLLPGDPLRAKFIAETYLDDVEQFNTVRNMFGFTGTYKGKKVSVMGSGMGMPSIGIYSYELIHTFGCKKLIRVGSCGAMQENIDLYDVIIAQGASTDSNYVQQYQLPG-HFAPIASYQLLEKAVETARDKGVRHHVGNVLSSDIFYNADTTASERWMRMGILGVEMESAALYMNAIYAGVEALGVFTVSDHLIHETSTTPEERERAFTDMIEIALSLV
2AC7 Chain:B ((11-229))
-------------EIAESILLPGDPLRAKYIAETFLEDVTCYNNVRGMLGFTGTYKGKRVSVQGTGMGVPSISIYVNELIQSYGVKNLIRVGTCGAIQKDVKVRDVIIAMTACTDSN-MNRLTFPGFDFAPAANFDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYTLAAKYGVNALSVLTVSDHIF----------QTTFNEMIEIAL---
General information:
TITO was launched using:
RESULT:
Template:
2AC7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167477 for 1827 contacts (-91.7/contact) +
2D Compatibility (PS) -22422 + (NN) -4800 + (LL) 1448
1D Compatibility (HY) -25600 + (ID) 5850
Total energy: -224701.0 ( -122.99 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_2AC7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AC7-query.scw
PDB file :
Tito_Scwrl_2AC7.pdb
: