Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPLEIPTKYDSLLKKKVSLKTSFTFMLIIVLIIWSFIYTGFNFGDLMIGIPQIGDLFKQMIPPDFEYLQQITTPMLD----TIRMAIVSTVLGSIVSIPIALLCASNIVHQKWISIPSRFILNIVRTIPDLLLAAIFVAVFGI--------GQIPGILALFILTICIIGKLLYESLETIDPGPMEAMTAVGANKIKWIVFGVVPQAISSFMSYVLYAFEVNIRASAVLGLVGAGGIGLFYDQTLGLFQYPKTATIILFTLVIVVVIDYISTKVRAHLA- |
4YMU Chain:C ((1-214)) | ------------------------------------------------------------MTVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSI---KPIKLVASSYIEVIRGTP--LLVQLLLIYNGLMQFGMNIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFADLTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194299 for 1458 contacts (-133.3/contact) +
2D Compatibility (PS) -20486 + (NN) 579 + (LL) 5456
1D Compatibility (HY) -14000 + (ID) 2000
Total energy: -224750.0 ( -154.15 by residue)
QMean score : 0.354
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