Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METIKQEVRESIVKGIIAGYKDYVNERNEVKKRMVISDAYAFTKSNHIESQVAKHLENFVKYIKENAGPSWKYLKFIFNKD---EEKNNIMFILKNEDYFDEKNVSVGKSLVADKNPKSKNYLEVLMAKNRDINFGTVGEDFEIGHQMTADSILFNIKEGSNRDINSYFLIITYRIDKESKQLAAIKQWLPNPETNSAIMVDDLTELIEKVIVEREDYHIDEEELEVLKNDGELELIDVEHAFGISIDEGNDMIESER |
4K36 Chain:B ((166-231)) | -----------------------------------------------VTSNTARHVNKVYKYFKEK---DFKFLQFINCLDPLYEEKGKYNYSLKPKDY--------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4059 for 235 contacts (-17.3/contact) +
2D Compatibility (PS) -4788 + (NN) 31 + (LL) 14580
1D Compatibility (HY) -4400 + (ID) 950
Total energy: 414.0 ( 1.76 by residue)
QMean score : 0.300
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