Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSNIVQDPRVLKQIETIKGVTNDYKIVGMNNSQATNRRLENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPDVIHANDFDVLLMVYLSNYK-KANIVYDAHEIYAKNAFINKV--PLISK----FVESIEKHIVKHRVNAFVTVSHAAKEYYQSKGY-K-KEANVITNAPILNDSREF----------------KEIENFKEIVYQGQIVM-DRGYEEFIIASSAFKQ----NAPSFIIRGFGPHE--EVIKELISYNSENIR-LDKPVEVKELVDKLAESNVGVILTKPVSINFEYTVSNKIFECIHAGLPVILSPVKEHIYLNEKYKFGIVLKEVTPLEIEKAVRKLRDN-HDLFNHLRQNAIKASKILNWQIESERLVELYKF |
| 3FRO Chain:A ((121-428)) | -------------------------------------------------------------------------------------PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGY-IADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEK-HGNVKVITEMLSREFVRELYGSVDFVIIP------SYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96526 for 2132 contacts (-45.3/contact) +
2D Compatibility (PS) -28963 + (NN) -5905 + (LL) 6808
1D Compatibility (HY) -2400 + (ID) 2400
Total energy: -129386.0 ( -60.69 by residue)
QMean score : 0.415
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