Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKILILCQYFYPE--YVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQ--V-SK------------TEMHRGIRIRRLKYSRFNNK--------SK---VGRIINFF---SLFSKFVINIPKMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATR----------PGSMIDKLMRYINRHVYKNAENVIVLGTEMKNYLLNH----QI--------SKNADNIHVIPNWYDMRQLQDNRIYN--------------DTFKAYR-------EQYDKILLYSGNMGQLQDMETLISFLKLNKDQPQTLTILCGHGKK--FADVKTAIEDHRIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQY---------DAGIQIDNGDAHAIYNFINTH-S-SKELHEMGERAHQLFKDKYTREINTMKYYNLLK |
| 2QZS Chain:A ((1-474)) | ---MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAG-LAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHR--EGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE-QGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHE-AFSHRIMGGADVILVPSRFEPCGLT----QLYGLKYGTLPLVRR--TGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QZS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -206174 for 3326 contacts (-62.0/contact) +
2D Compatibility (PS) -40578 + (NN) -6489 + (LL) 468
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -260723.0 ( -78.39 by residue)
QMean score : 0.336
|
|
|