Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MKRLFDVV----SSIY-----------GLVVL-SPILLITA-------LLIKMESPGPAIFKQKRPTINNELFNIYKFR-SMKIDTPNVATD------LMDSTSYITKTGKVI----RKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDD--QKVAYDHYYLTHQ-SMMLDMYIIYKTIKNIVTSEGVHH----------------------- |
| 4CIJ Chain:A ((3-269)) | MSGLKPCVDWLQVTFKTGQDSVKKCVEKLEKVFEILGLNEAEFLPLKNGKYGYKQGVAFQGNPVLAVYYDGADDMGIHVEMTGQGCRLFELHTSINWYELFYRLVYEYEVNITRLDVAVDDFKGYFKINTLVKKLKDDEVTSRFKKARHIENIVIEGGETIGHTLYFGA-PSSDIQVRFYEKNVQMG---MDIDVWNRTEIQLRDDRAHVVAQIIADDVLPLGEIVAGLLRNYIQFRTRKA--TDKNKKRWPLARFWLNFLGDVQPLRIAKQM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41493 for 1108 contacts (-37.4/contact) +
2D Compatibility (PS) -18403 + (NN) 3049 + (LL) 784
1D Compatibility (HY) -6800 + (ID) 1850
Total energy: -64713.0 ( -58.41 by residue)
QMean score : 0.127
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