Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----M-RLILIVI---GLIFTA---LGIAGAVLPLLPTTPFLLV----------AVFCFARSSDRFYNWLINQKIYKEYVE-NFYLHRGYTLQQKIKILISL------YIVIGFSIYMVDVLAVRVGLIIMVIIQTAVL-FTFVKTLPKSNHKIEE---------
1JB1 Chain:A ((21-193))
ERRS-MHGVLVDIYGLGVLITGDSGVGKSETALELVQRGHRLIADDRVDVYQQDEQTIVGAAPPILSHLLEIRGLGIIDV-MNLFGAGAVREDTTISLIVHLENWTPDQLIFDV-PVPKITVPVKVGRNLAIIIEVAA-MNFRAKSMGYDATKTFEKNLNHLIEH
General information:
TITO was launched using:
RESULT:
Template:
1JB1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160650 for 839 contacts (-191.5/contact) +
2D Compatibility (PS) -12832 + (NN) 1554 + (LL) 460
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -178168.0 ( -212.36 by residue)
QMean score : 0.173
(partial model without unconserved sides chains):
PDB file :
Tito_1JB1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JB1-query.scw
PDB file :
Tito_Scwrl_1JB1.pdb
: