Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MTRPTNNKFI-LPIITFIIFLGI-WEMVIIIGHYQPVLLPGPALV---GKSIWTFIVTGEIFQH-----LAISLWRFVAG-------------FVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIGSLPAIAIIFIAA-FFPIVFNTIKGVR-DIEPQYLKIA-AN---LNLTGWS---------------LYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLE--------DVLAAIFFIGLFGFIIDRFISYIEQFILRRFGE |
| 4QIK Chain:A ((4-313)) | GVEDTKHYEEAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRAS-------CFKSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRT----------GDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNH------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -236708 for 1526 contacts (-155.1/contact) +
2D Compatibility (PS) -23214 + (NN) -3935 + (LL) 2524
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -270733.0 ( -177.41 by residue)
QMean score : 0.242
|
|
|