Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTHTKEQQFSNLVRSYRKEYVGKGPNSIRVSFKDNWAIAHMTGVLSKVESFYLNDKRNESMLHYTRTEKIKQMYKEIDVNEMESLVGAKFVKLFTDIDLNDDEVISIFVFDKSIE
2WKB Chain:A ((71-105))
----SNNSLLADKITKILSNHLSVKPRRVYIEFRD---------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WKB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4634 for 133 contacts (34.8/contact) +
2D Compatibility (PS) -3543 + (NN) -3454 + (LL) 6928
1D Compatibility (HY) -2000 + (ID) 150
Total energy: 2415.0 ( 18.16 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_2WKB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WKB-query.scw
PDB file :
Tito_Scwrl_2WKB.pdb
: