Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGFSVYLGQPLDEAYIKRMIKQGYQMIFTSVQIPEEDD----ETKYHYFTKLLNLLKYEQVTYLIDAN-PSILTPSFYEHLRQYDAQFMIRIDHSTSIE--AIEAIMAQGLKCCLNASI-ISRELLTSLHQQLN--DFTLLSFCH----NYYPRPDTGLSVDLVNKKNELIYQFNPKAQIYGFIVGSGLRGPLHKGLPTIEATRHSHPVVAAKLLQETGVSEVLVGDSLIEMRQAKQLIDFCKHRHFTLCIEEVFDTTVTYLFDMCHKVRPDNPENVIRSETSRQICPHSIQPQFTTQRRIGSVTVDNLNNGRYQGEMQIVRQTLSAHDNVNVVAQIIKEDLPLLSCIEPNDTFDFQKTRECKK |
| 1VS1 Chain:A ((55-201)) | -------------REAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTEVLDPRHVETV-------SRYADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99612 for 928 contacts (-107.3/contact) +
2D Compatibility (PS) -14321 + (NN) -9518 + (LL) 14856
1D Compatibility (HY) -800 + (ID) 750
Total energy: -110145.0 ( -118.69 by residue)
QMean score : 0.431
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