Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVYSINMNMYTRLLLLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGILSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKN-AYQATFQRNPGFNETEKGSYGSPKIKNITLKFNGDPNNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIK-FYRGDKFKIASPITPLVDTGN---EQRQDLEKVEKAINQ |
| 3RQT Chain:A ((21-319)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKDLNISL-PLKTKSIAPYET----DVPVKIGAAESLFKTNDQGKIE--KALVKSYHQP-NDTTLDIELKDNIKFQ---------NGQKLTAEKVKSSLENSMKKSDLVK-----YSLPISSITAK--------------------------------------------G-QKLTIKTNSAYPELVSELANPFMAIYDTDAKS--------------------DVNQTPVGTGPYQIKDYKQSRKISLSNFKDYWQ------GKPKLDHITVTYQEDGNNRVRNLESQKDDLITDVPVNKVQDIENNQNLKVSKESGFRTSLLMYNHTN-KKM-TKSVREALDHIIDRQGIADHIYQGYAKPATSPFNDKIPYIKEPKLTKQNIEQAKMLLAK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -59444 for 2117 contacts (-28.1/contact) +
2D Compatibility (PS) -31304 + (NN) -15183 + (LL) 15128
1D Compatibility (HY) -10800 + (ID) 2850
Total energy: -104453.0 ( -49.34 by residue)
QMean score : 0.396
|
|
|