Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMIIAIVQDQDSQELADQLVKNNF-RATKLATTGGFL---RAGNTTFLCGVNDDRVDEILSVINQTCGNREQLVSPITPMGGSADSYIPYPVEVEVGGATVFVMPVDAFHQF
2GW8 Chain:A ((1-102))
MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKG-FGRVDFLPKIKIELVLADDAVERAIDVIVEVARS--------------G----------KIGDGKIFVLPVEEAIRI
General information:
TITO was launched using:
RESULT:
Template:
2GW8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54336 for 528 contacts (-102.9/contact) +
2D Compatibility (PS) -9428 + (NN) -5762 + (LL) 796
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -74930.0 ( -141.91 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_2GW8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GW8-query.scw
PDB file :
Tito_Scwrl_2GW8.pdb
: