Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTKIMGILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAATTAYGIMKGVRAVRVHNVELNAKLAKGIDFLKENENARHNLS
4HB7 Chain:B ((5-267))
-TKTKIMGILNVT----------NNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAATTAYGIMKGVRAVRVHNVELNAKLAKGIDFLKENENARH---
General information:
TITO was launched using:
RESULT:
Template:
4HB7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121227 for 2137 contacts (-56.7/contact) +
2D Compatibility (PS) -28455 + (NN) -22797 + (LL) -88
1D Compatibility (HY) -35200 + (ID) 12650
Total energy: -220417.0 ( -103.14 by residue)
QMean score : 0.782
(partial model without unconserved sides chains):
PDB file :
Tito_4HB7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HB7-query.scw
PDB file :
Tito_Scwrl_4HB7.pdb
: