Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIMITGALGQIGTELVVKCREIYGTDNVLATDIREPEADSPVQNGPFEILDVTDRDRMFELVRDFEADSLMHMAALLSATAEKNPILAWDLNMGGLMNALE-AARTYNLHFFTPSSIGAFGDSTPKVNTPQVTIQQPTTMYGVNKVAGELLCQYYFKRFGVDTRSVRFPGLISHVKEPGGGTTDYAVEIYFKAVREGHYTSFIDKGTYMDMMYMDDAIEAIIKLMEADDAKLETRNGYNLSAMSFDPEMVKEAIQEYYPNFTLDYDVDPIRQGIANSWPDSIDTSCSRGEWGFDPKYDLASMTKLMLEAIEQKDTVKNNN |
| 2YY7 Chain:B ((4-311)) | --KILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDV-VNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPD-FRQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137929 for 2742 contacts (-50.3/contact) +
2D Compatibility (PS) -32823 + (NN) -14558 + (LL) 272
1D Compatibility (HY) -28400 + (ID) 7850
Total energy: -221288.0 ( -80.70 by residue)
QMean score : 0.467
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