Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIKEQEVIDLLASFEHKPVYLHVETTNGAYANHFDQRVFNAGTFLRNIQVTYTHAQLKGGNKEPYRIGLKLSNGGWVYVQGLTHFEVNEHDEFLIAGFNYEGQLAAALQISERPFNL
1NJH Chain:A ((4-119))
MKAIIKEDVQASLERYADRPVYIHLETTTG----------MTVVAYIRNAKVTYHQAKIKGNG--PYRVGLKT-EEGWIYAEGLTEYTVDEENRLLMAGHLPGGKLAISLQISEKPFTV
General information:
TITO was launched using:
RESULT:
Template:
1NJH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74783 for 733 contacts (-102.0/contact) +
2D Compatibility (PS) -11690 + (NN) -5046 + (LL) 952
1D Compatibility (HY) -10000 + (ID) 2350
Total energy: -102917.0 ( -140.41 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_1NJH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NJH-query.scw
PDB file :
Tito_Scwrl_1NJH.pdb
: