Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKSMPEHVNMMDKSMKHHI--IIDQIGDENKAILKDFLMNHDEGMWKLSSDALHQAFN
1X6I Chain:A ((12-56))
-----------------------------------------------------------------------------------------------------------ACRRGMR-------ELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFN-----------
General information:
TITO was launched using:
RESULT:
Template:
1X6I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13368 for 224 contacts (-59.7/contact) +
2D Compatibility (PS) -4472 + (NN) -1098 + (LL) 7400
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -16138.0 ( -72.04 by residue)
QMean score : 0.077
(partial model without unconserved sides chains):
PDB file :
Tito_1X6I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X6I-query.scw
PDB file :
Tito_Scwrl_1X6I.pdb
: