Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK
3M9Y Chain:B ((2-254))MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK


General information:
TITO was launched using:
RESULT:

Template: 3M9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -99029 for 2177 contacts (-45.5/contact) +
2D Compatibility (PS) -28024 + (NN) -17119 + (LL) 0
1D Compatibility (HY) -30400 + (ID) 12650
Total energy: -187222.0 ( -86.00 by residue)
QMean score : 0.619

(partial model without unconserved sides chains):
PDB file : Tito_3M9Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M9Y-query.scw
PDB file : Tito_Scwrl_3M9Y.pdb: