Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFREQVLNLLAEVAEN--DIVKENPDVEIFEEGIIDSFQTVGLLLEIQNKLDIEVSIMDFDRDEWATPNKIVEALEELR
2JQ4 Chain:A ((2-75))
---NATIREILAKFGQLPTPVDTIADEADLYAAG-LSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKL--
General information:
TITO was launched using:
RESULT:
Template:
2JQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15559 for 492 contacts (-31.6/contact) +
2D Compatibility (PS) -7193 + (NN) -1305 + (LL) 924
1D Compatibility (HY) -6000 + (ID) 750
Total energy: -29883.0 ( -60.74 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_2JQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JQ4-query.scw
PDB file :
Tito_Scwrl_2JQ4.pdb
: