Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIE------QDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
2CT6 Chain:A ((10-86))
IRVFIA-SSSGFVAIKKKQQDVVRFLEAN--------KIEFEEVDITMSEE----QRQWMYKNVPPEKKPTQGNPLPPQIFNGDRYCGDY------------------
General information:
TITO was launched using:
RESULT:
Template:
2CT6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47752 for 484 contacts (-98.7/contact) +
2D Compatibility (PS) -6918 + (NN) 2687 + (LL) 2320
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -53113.0 ( -109.74 by residue)
QMean score : 0.354
(partial model without unconserved sides chains):
PDB file :
Tito_2CT6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CT6-query.scw
PDB file :
Tito_Scwrl_2CT6.pdb
: