Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKTYEKIANINGMFNMLEQQIIHSQDMAHFRSEFFYVNHEHRENYEALLIYYKNSIDNPIVDGACYILALPEIFNSVDV---FESELPFSWVYDENGITETMKSLSIPLQYLVAAALEVTDV----NIFKPSGFTMGMNNWNIAQMRIFWQYTAIIRKEAL--
4M91 Chain:A ((2-154))
-SKKENLLAEKVEQLMEWSSRRSIFRMNGDKFRKFI----KAPPRNYSMIVMFTALQPQRQCSVSRQANEEYQILANSWRYSSAFSNKLFFSMVDYDEG-TDVFQQLNMN------SAPTFMHFPPKGRPKRADTFDLQRIGFAAEQLAKWIADRTDVHIRVFRL
General information:
TITO was launched using:
RESULT:
Template:
4M91.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59683 for 1064 contacts (-56.1/contact) +
2D Compatibility (PS) -15215 + (NN) -2831 + (LL) 1648
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -82281.0 ( -77.33 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_4M91.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M91-query.scw
PDB file :
Tito_Scwrl_4M91.pdb
: