Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQFDSKAAYEQHLVTLLNKDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQRQCDIRPDDSKEQLEEKVKKLEYELYPSVIAKIVK
3P9X Chain:B ((3-187))
-KRVAIFASGSGTNAEAIIQSQKAGQLP-CEVALLITDKPGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSLLPAFPGLHAIEQAIRANVKVTGVTIHYVDEGMDTGPIIAQEAVSIEEEDTLETLTTKIQAVEHRLYPATLHKLL-
General information:
TITO was launched using:
RESULT:
Template:
3P9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123495 for 1454 contacts (-84.9/contact) +
2D Compatibility (PS) -20296 + (NN) -15152 + (LL) 192
1D Compatibility (HY) -19600 + (ID) 4300
Total energy: -182651.0 ( -125.62 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_3P9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P9X-query.scw
PDB file :
Tito_Scwrl_3P9X.pdb
: