Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
3DIE Chain:B ((3-106))
MAIVKVTDADFDSKVESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
General information:
TITO was launched using:
RESULT:
Template:
3DIE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41709 for 542 contacts (-77.0/contact) +
2D Compatibility (PS) -11125 + (NN) -4273 + (LL) 0
1D Compatibility (HY) -15200 + (ID) 5100
Total energy: -77407.0 ( -142.82 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_3DIE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DIE-query.scw
PDB file :
Tito_Scwrl_3DIE.pdb
: