Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVR |
1L8C Chain:B ((1-51)) | --------------------------------------------------------------------------SDLACRLLGQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6008 for 193 contacts (31.1/contact) +
2D Compatibility (PS) -5365 + (NN) -963 + (LL) 8188
1D Compatibility (HY) -2800 + (ID) 400
Total energy: 4668.0 ( 24.19 by residue)
QMean score : 0.279
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