Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNEKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESNEKIQSRINEARKEVEMMNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERVEAKYRKMILEAKK
4QRH Chain:D ((6-203))
--NEKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHL--------------IQSRINEARKEVEMMNLYDYVVVNDEVELAKNRIQCIVEAEHLKRERVEAKYRK-------
General information:
TITO was launched using:
RESULT:
Template:
4QRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70615 for 1325 contacts (-53.3/contact) +
2D Compatibility (PS) -19910 + (NN) -7010 + (LL) 1740
1D Compatibility (HY) -26800 + (ID) 9150
Total energy: -131745.0 ( -99.43 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_4QRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QRH-query.scw
PDB file :
Tito_Scwrl_4QRH.pdb
: