Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
3SJ7 Chain:B ((9-252))
--MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSD-TDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
General information:
TITO was launched using:
RESULT:
Template:
3SJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102020 for 2108 contacts (-48.4/contact) +
2D Compatibility (PS) -26412 + (NN) -6892 + (LL) 480
1D Compatibility (HY) -31600 + (ID) 12150
Total energy: -178594.0 ( -84.72 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_3SJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SJ7-query.scw
PDB file :
Tito_Scwrl_3SJ7.pdb
: