Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE
1F75 Chain:B ((19-242))
----------------------QIPKHIAIIMDGNGRWAKQKKMPRIKGHYEGMQTVRKITRYASDLGVKYLTLYAF------------NYLMKLPGDFLNTFLPELIEKNVKVETIGFIDDLPDHTKKAVLEAKEKTKHNTGLTLVFALNYGGRKEIISAVQLIAERYKSGEISLDEISETHFNEYLFTANMPDPELLIRTSGEERLSNFLIWQCSYSEFVFIDEFWPDFNEESLAQCISIYQNR----------
General information:
TITO was launched using:
RESULT:
Template:
1F75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111402 for 1673 contacts (-66.6/contact) +
2D Compatibility (PS) -22554 + (NN) -6996 + (LL) 2148
1D Compatibility (HY) -27200 + (ID) 7000
Total energy: -173004.0 ( -103.41 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_1F75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F75-query.scw
PDB file :
Tito_Scwrl_1F75.pdb
: