Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNKDDVLKQADNIANKIKNLDTIKTYQQIEAQIHQNQTIKTKMDMLKKHQKQAVNFQNYGKQNALEQSEHTIQSIEAEINTLPIVEQFQTSQYEANQLLKMFVSTMETRLNDHNKAKHSD |
2PIH Chain:A ((3-123)) | LYSKKDIVQQARNLAKMISETEEVDFFKRAEAQINENDKVSTIVNQIKALQKQAVNLKHYEKHEALKQVEAKIDALQEELEEIPVIQEFRDSQMEVNDLLQLVAHTISNQVTNEIITSTGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 44947 for 657 contacts (68.4/contact) +
2D Compatibility (PS) -13051 + (NN) -4299 + (LL) 0
1D Compatibility (HY) 6400 + (ID) 550
Total energy: 33447.0 ( 50.91 by residue)
QMean score : 0.264
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