Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEIETIISEIEKLL--TNNTPYSISKNSGVPRQTVTDLKVGKTKIKEAKFKTIIKLYEYQRTLENKTEC
1ADR Chain:A ((4-61))
----QLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSE---TEPNGENLLALSKALQCSP-----
General information:
TITO was launched using:
RESULT:
Template:
1ADR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3088 for 378 contacts (8.2/contact) +
2D Compatibility (PS) -5743 + (NN) 904 + (LL) 952
1D Compatibility (HY) 0 + (ID) 300
Total energy: -1099.0 ( -2.91 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_1ADR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ADR-query.scw
PDB file :
Tito_Scwrl_1ADR.pdb
: