Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MIQISNINKSFN--KRCVLKNISFDIEQGKCIALIGKNGAGKSTLIDILIGNVNANSGEIFDKDKLLQSENR----------SIMFQKTMFPDQLKVIEIINLYQSFYENPLPLEEIIELTKFDSS------QLNQFVNKLSGGQQRLLDFVLSLIGQPQLILLDEPTSTMDIEIREYFWSIIENLKEDNR-TILYTSHYIEEVERMSDKIILIENGEIILNDSTSHIRTNQQSQITLS---DEYIRKLKLDKDDLVI------QKNHNGTIKII-----------------TSNVNDTILYLQQLHINLDDIEIQ---KVSIVDSYFNNKKQRGSNYDTKLLENRI----- |
| 1OXS Chain:C ((1-352)) | MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFE--NIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108873 for 2189 contacts (-49.7/contact) +
2D Compatibility (PS) -31670 + (NN) -2811 + (LL) 408
1D Compatibility (HY) -14000 + (ID) 3550
Total energy: -160496.0 ( -73.32 by residue)
QMean score : 0.430
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