Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSEREIQQQELTYIVRSLINTMYPH-QPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGVKVIKHGNKSITSN-SGSTDLLNQMNIQ-TTTVDDTPNQLNEKDLVFIGATESYPIMKYMQPVRKMIGKPTILNLVGPLINPYHLTYQMVGVFDPTKLKLVAKTIKDLGRKRAIVLHGANGMDEATLSGDNLIYELTEDGEIKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNILNGKDQSSRRDVVLLNAGLSLYVAEKVDTIAEGIELATTLIDNGEALKKYHQMRGE |
| 1KGZ Chain:B ((52-337)) | --------------------------------------LISMKMRGERPEEIAGAASALLADAQPFPRPDYDFADIV-GTGGDGTNSINISTASAFVAASCGAKVAKHGNRSV---LAGSCDLLQAFGIRLDMSAEDSRQALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHG-GGMDEVAIHTPTQVAELN-NGEIESYQLSPQDFGLQSYSLNALQGGTPEENRDILARLLQGKGDAAHARQVAANVALLLKLFGQ-DNLRHNAQLALETIRSGTAFER------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138720 for 2481 contacts (-55.9/contact) +
2D Compatibility (PS) -29549 + (NN) -11548 + (LL) 4444
1D Compatibility (HY) -12000 + (ID) 5100
Total energy: -192473.0 ( -77.58 by residue)
QMean score : 0.455
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