Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTILAEIVKYKQSLLQNGYYQDKLNTLKS-VKIQNK-KSFINAIEKE---PKLAIIAEIKSKSPTVNDL-PERDLSQQISDYEKYGANAVSILTDEKYFGGSFERLQALTTKTTLPVLCKDFIIDPLQIDVAKQAGASMILLIVNILSDKQLKDLYNYAISQNLEVLIEVHDRHELERAYKVNAKLIGVNNRDLKRFVTNVEHTNTILENKKPNHHYISESGIHDASDVRKILHSGIDGLLIGEALMRCDNLSEFLPQLKMQKVKS
3TSM Chain:B ((9-254))
--ILRKIEAYKREEIAAAKARLALDELKARTRDQSAPRGFLKALEAKRAAGQFALIAEIKKASPSKGLIRPDFDPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMR------------------
General information:
TITO was launched using:
RESULT:
Template:
3TSM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130405 for 1936 contacts (-67.4/contact) +
2D Compatibility (PS) -26139 + (NN) -8020 + (LL) 1560
1D Compatibility (HY) -15200 + (ID) 4450
Total energy: -182654.0 ( -94.35 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_3TSM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TSM-query.scw
PDB file :
Tito_Scwrl_3TSM.pdb
: