Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------MKIISISETPNHNTMKITLSE--------SREGMTSDTYTKVDDSQPAFINDILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFE-------------
2LTL Chain:A ((1-119))
MGHHHHHHSHMNSQRLIHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVESLMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYGEDVISKE
General information:
TITO was launched using:
RESULT:
Template:
2LTL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26199 for 554 contacts (-47.3/contact) +
2D Compatibility (PS) -9027 + (NN) -1711 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -42187.0 ( -76.15 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_2LTL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LTL-query.scw
PDB file :
Tito_Scwrl_2LTL.pdb
: