Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAINAGAVNTVLIKDGKWIGYNTDGIGYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMARFESWNLNI---------NQISLADAEKYLAEFDIVINTTPAGMAGN--NESIINLKHLSPNTLMSDIVYIPYKTPILEEAERKGNHIYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE
1NVT Chain:B ((14-285))--IGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTIKIEDGKAIGYNTDGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK--DNNIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI---


General information:
TITO was launched using:
RESULT:

Template: 1NVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156889 for 2257 contacts (-69.5/contact) +
2D Compatibility (PS) -27492 + (NN) -5661 + (LL) 592
1D Compatibility (HY) -24000 + (ID) 5200
Total energy: -218650.0 ( -96.88 by residue)
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_1NVT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NVT-query.scw
PDB file : Tito_Scwrl_1NVT.pdb: