Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MITFENIQQLEKYTLMTMHGLFNQLKLGIISIDNAEHTLFTPYMMESLSSLGVKPDIIDLIHKGTELEDFAAFNLSIEDTVTVCLQRTEELLNQYKNVEFNDKILINWRIIQE------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4TWA Chain:A ((3-497)) | MAITSKKIENFSDWYTQVIVKSELIEYYDISGCYILRPAAYYIWECVQAFFNKEIKKLNVENSYFPLFVTKNKLEKEKNHIEGFSPEVAWVTKYGDSNLPEEIAIRPTSETIMYSVFPKWIRSYRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWYEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFISENGRAIQAATSHYLGTNFAKMFKIEFEDENEVKQYVHQTSWGCTT-RSIGIMIMTHGDDKGLVLPPNVSKYKVVIVP----IFYKTTDENAIHSYCKDIEKILK----------NAQINCVYDDRASYSPGYKFNHWELRGIPIRIEVGPKDLQNNSCVIVRRDNNEKCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDSIVQVTSFSEVMNALNKKKMVLAPWCEDIATEEEIKKETQRLSLTLSGAMKPLCIPLDQPPMPPNMKCFWSGKPAKRWCLFGRSY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2704 for 459 contacts (5.9/contact) +
2D Compatibility (PS) -10111 + (NN) 3109 + (LL) 1632
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -4716.0 ( -10.27 by residue)
QMean score : -0.055
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