Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKMGLLVMAYGTPYKESDIEPYYTDIRHGKRP-------------SEEELQDLKDRYEFIGGLSPLAGTTDDQADALVSALNK-AYADVEFKLYLGLKHISPFIEDAVEQMHNDGITEAITVVLAPHYSSFSVGSYDKRADEEAAKY----GIQLTHVKHYYEQPKFIEYWTNKVNETLAQIPEEEHKDTVLVVSAHSLPKGLIEKNNDPYPQELEHTALLIKEQSNI-EHIAIGWQSE-GNTGTPWLGPDVQDLTRDLYEKHQYKNFIYTPVGFVCEHLEVLYDNDYECKV-VCDDIGA-NYYRPKMPNTHPLFIGAIVDEIKSIF |
| 3HCN Chain:A ((1-324)) | RKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPIQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVN-RGDPYPQEVSATVQKVMERLEYCNPYRLVWQSKVGP--MPWLGPQTDESIKGL-CERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108652 for 2483 contacts (-43.8/contact) +
2D Compatibility (PS) -32568 + (NN) -13116 + (LL) 168
1D Compatibility (HY) -17200 + (ID) 4100
Total energy: -175468.0 ( -70.67 by residue)
QMean score : 0.527
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