Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDVPYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKHD---VPVILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQLGVTK-TLQGNLDPSILLAPWNVIEERLKPILDQGMENGK---HIFNLGHGVFPEVQPETLRKVSEFVHTYTQR |
| 4ZR8 Chain:B ((12-362)) | ---LKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHALLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDGRRIPVIVFTKGGGQWLEPMITTGADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYGSAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYSAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220648 for 3024 contacts (-73.0/contact) +
2D Compatibility (PS) -36304 + (NN) -13482 + (LL) 444
1D Compatibility (HY) -25200 + (ID) 6650
Total energy: -301840.0 ( -99.81 by residue)
QMean score : 0.493
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