Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQIEKLRGAALDELFDAILTLENREECYQFFDDLCTVNEIQSLSQRLQVAKMIKQGYTYATIEQESGASTATISRVKRSLQWGNDAYTMILDRMNIETNE
2K27 Chain:A ((28-66))
------------------------------------------EVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYY-------------------
General information:
TITO was launched using:
RESULT:
Template:
2K27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -193 for 204 contacts (-0.9/contact) +
2D Compatibility (PS) -4311 + (NN) -998 + (LL) 5028
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -1974.0 ( -9.68 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_2K27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K27-query.scw
PDB file :
Tito_Scwrl_2K27.pdb
: