Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MKKFFFIGLLV-FVVFFTAATIIWFSYDKNKYGTKQYDKTFKDDAFDNVSINLDSTELRIKRGNQ---------------FRVKYDGD-NDILINIVD-----------KTLKISDKRSKT--------RGYAIDMNPFHENKKTL------TIEMPDKMIKRLNLSSGAGSVRISDVDLENTSIQSINGEVVIKNSNLDALDSKTNNSST---------------YISKSNIKNSNIKVV-------IGTLQIDKSQIK----QSIFLNDHG----------DIEFKNMPSKVDAKAST-KQGDIRFKYDSKPEDTILK--LNPGTGDSVVKNKTFTNGKVGKSDNVLEFYTIDGNIKVE---- |
| 1SQ9 Chain:A ((3-395)) | KVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHNNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1SQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 32256 for 1900 contacts (17.0/contact) +
2D Compatibility (PS) -29912 + (NN) -4024 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -12530.0 ( -6.59 by residue)
QMean score : 0.155
|
|
|