Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKRPEKIQNVVKLLSSLGVNIKKTK--SRLDIINTLPASNKVSHELK--------------------------------------------------- |
| 1JQE Chain:A ((13-292)) | GKYVESFRRFLNHSTEHQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNLGLKYECYDLLSTMDISDCFIDGNENGDLLWDFLTETCNFNATAPPDLRAELGKDLQEPEFSAKKEGKVLFNNTLSFIVIEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1180 for 179 contacts (-6.6/contact) +
2D Compatibility (PS) -4675 + (NN) -1606 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -10661.0 ( -59.56 by residue)
QMean score : 0.400
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