Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILVIGANGGVGSLLVQQLAKENVPFTAGVRQSDQLNALKSQGM-KAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKEANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGSGKIEAA-QYFDGKGEIPREDVATVLKEIVTSNHFNHQEFQIISGEQDIKDALTQFEIEKD
3E8X Chain:A ((22-234))
MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE---ED-FSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQG-PMNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIAKVVEQL-----
General information:
TITO was launched using:
RESULT:
Template:
3E8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106846 for 1786 contacts (-59.8/contact) +
2D Compatibility (PS) -22555 + (NN) -4132 + (LL) 192
1D Compatibility (HY) -18000 + (ID) 3650
Total energy: -154991.0 ( -86.78 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3E8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E8X-query.scw
PDB file :
Tito_Scwrl_3E8X.pdb
: