Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILKFDHIIHYIDQLDRFS--FPGDVIKLHSGGYHHK-YGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLRTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFRIEDGKVSKYHSVIIKDAQATSPYSIFIRGAIYRFEPLV
3HDP Chain:A ((4-104))MSLKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPI------------NKTIK---KGSTPYHICYEVEDIQKSIEEMSQIGYTLFK---------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3HDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16835 for 600 contacts (-28.1/contact) +
2D Compatibility (PS) -10338 + (NN) 553 + (LL) 11728
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -19242.0 ( -32.07 by residue)
QMean score : 0.258

(partial model without unconserved sides chains):
PDB file : Tito_3HDP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HDP-query.scw
PDB file : Tito_Scwrl_3HDP.pdb: