Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKSINHICFSVRNLNDSIHFYRDILLGKLLLTGKKTAYFELAGLWIALNEEKDIPRNEIHFSYTHIAFTIDDSEFKYWHQRLKDNNVNILEGRVRDIRDRQSIYFTDPDGHKLELHTGTLENRLNYYKEAKPHMTFYK
4NB2 Chain:B ((8-145))
MLKSINHICFSVRNLNDSIHFYRDILLGKLLLTGKKTAYFELAGLWIALNEEK---------SYTHIAFTIDDSEFKYWHQRLKDNNVNILEGRVRDIRDRQSIYFTDPDGHKLELHTGTLENRLNYY------MTFY-
General information:
TITO was launched using:
RESULT:
Template:
4NB2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66324 for 794 contacts (-83.5/contact) +
2D Compatibility (PS) -13108 + (NN) -3094 + (LL) 836
1D Compatibility (HY) -19600 + (ID) 6150
Total energy: -107440.0 ( -135.31 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_4NB2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NB2-query.scw
PDB file :
Tito_Scwrl_4NB2.pdb
: