Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MSFYEFMQSFLGDDTPLGELVDWINQDSNFPREVKSHSEILSYFRTNPCPESISVPVIKRALSVFNQFTNVQ----
2KVS Chain:A ((1-80))
MAGDPMTFYNFIMGFQNDNTPFGILAEHVSEDKAFPRLEERHQVIRAYVMSNY-TDHQLIETTNRAISLYMANLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33303 for 425 contacts (-78.4/contact) +
2D Compatibility (PS) -7229 + (NN) -1434 + (LL) 56
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -45760.0 ( -107.67 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_2KVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KVS-query.scw
PDB file :
Tito_Scwrl_2KVS.pdb
: