Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNKQVEISMAEWDVMNIIWDKKSVSANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKRYKSENIYFYSSNIKEDDIKMKTAKTFLNKLYGGDMKSLVLNFAKNEELNNKEIEELRDILNDISKK
1SAX Chain:B ((3-121))
--NKTYEISSAEWEVMNIIWMKKYASANNIIEEIQMQKDWSPKTIRTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYKTSKNFINKVYKGGFNSLVLNFVEKEDLSQDEIEELRNILN-----
General information:
TITO was launched using:
RESULT:
Template:
1SAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50098 for 714 contacts (-70.2/contact) +
2D Compatibility (PS) -13157 + (NN) -8066 + (LL) 488
1D Compatibility (HY) -13200 + (ID) 3650
Total energy: -87683.0 ( -122.81 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_1SAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SAX-query.scw
PDB file :
Tito_Scwrl_1SAX.pdb
: