Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLCVALDLEKKEDNLSLLQELKGLDLWAKVGLRSFIRDGATFLDEIRKIDGNFKIFLDLKLYDIPYTMANAALECAKLDIDMLTVHLSSAKSALTILMQRLNALKKRPLIMGVSALTSFSEEEFLMVYNAPLKTQAITLSAIGKESGIDGVVCSVFESLAIKEALGKGFLTLTPGIRLDKNDKEDQERVANAKEAKQNLSDFIVVGRPIYQAKEPREVVLELLKDC
3RU6 Chain:D ((25-247))
MKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFIEELKKVD-DFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVFESKKIKEHTSSNFLTLTPGIRPFG--------VANLAMARENLSDYIVVGRPIYKNENPRAVCEKILNKI
General information:
TITO was launched using:
RESULT:
Template:
3RU6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171886 for 1764 contacts (-97.4/contact) +
2D Compatibility (PS) -23384 + (NN) -9554 + (LL) 88
1D Compatibility (HY) -26000 + (ID) 5900
Total energy: -236636.0 ( -134.15 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_3RU6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RU6-query.scw
PDB file :
Tito_Scwrl_3RU6.pdb
: