Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRALETIATLREYRKSL-KESVGFVPTMGALHRGHQSLIERSLKENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCEKSGVNAVFAPKIGEMYPYEAKQRLKLYAPAFLSHSLEGAVRKGHFDGVVQVVLRLFHLTNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSDNLALSSRNVCLNATERKQALAIPKALEKIQQAIDRGEKACEKLK--KLGLEILKNLEVDYLECCN-HKLEPLKTIEPANTLVLVAARVGKTRLLDNLWV |
1V8F Chain:B ((1-274)) | ---MRTVSTVAELRAALPREGVGFVPTMGYLHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAGVDLLFAPGVEEMYPEGFATRVQVEGP--LTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVPTVREEDGLALSSRNVYLSPETRKKAPVLYRALLAMREVAGQGGSVAEALRAGEEALRAVPEFRKDYLAIVHPETLLPLSDWV-AGARGIVAGRFPEARLIDNLEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144466 for 2212 contacts (-65.3/contact) +
2D Compatibility (PS) -29380 + (NN) -12423 + (LL) 588
1D Compatibility (HY) -25600 + (ID) 6250
Total energy: -217531.0 ( -98.34 by residue)
QMean score : 0.416
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