Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADSLAGIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNSLVEGLIIIRELTIPLIDMKKWFYYDSQNKSKDLRPYRIEKEKGEDDIVMICEFSRWTIGVRIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDGRLVQVVDIEKMLIDVFPWIEDEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPTTDVSNIGLIITDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADDFISKS-NPKDIQRVVKQFLELA |
3DGE Chain:D ((2-120)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKKVLLVDDSAVLRKIVSFNLKKEGYEVIEAENGQIALEKLSEFTPD-----LIVLDIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFIEEVKHLLNE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DGE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67595 for 903 contacts (-74.9/contact) +
2D Compatibility (PS) -12719 + (NN) -7590 + (LL) 14604
1D Compatibility (HY) -8400 + (ID) 2050
Total energy: -83750.0 ( -92.75 by residue)
QMean score : 0.546
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