Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKFLSLTLGSLLVSALSAEDNGFFVSAGYQIGESAQMVKNTKGIQDLSDSYERLNNLLTNYSVLNALIRQSADPNAINNARGNLNASAKNLINDKKNSPAYQAVLLALNAAAGLWQVMSYAISPCGPGKDTSKNGGVQTFHNTPSNQWGGTTITCGTTGYEPGPYSILSTENYAKINKAYQIIQKAFGSSGKDIPALSDTNTELKFTINKNNGNTNTNNNGEEIVTK-NNA--QVLLEQASTIITTLNSACPWINNGGAGGASS-GSLWEGI-YLKGDGSACGIFKNEISAIQDMIKNAAIAVEQSKIVAANAQNQRNLDTGKTFNPYKDANFAQSM-FANAKAQAEILNRAQAVVKDF--ERIPAEFVKDSLGVCHEVQNGHLR-GTPSGTVTDNTWGAGCAYVGETVTNLKDSIAHFGDQAERIHNA-RNLAYTLAN-FSSQYQKLGEHYDSITAAISSLPDAQSLQNVVSKKTNPNSPQGIQDNYYIDSNIHSQVQSRSQELGSNPFRRAGLIAASTTNNGAMNGIGFQVGYKQFFGKNKRWGARYYGFVDYNHTYNKSQFFNASSDVWTYGVGSDLLVNFINDKATKHNKISFGAFGGIALAGTSWLNSQYVNLANVNNYYKAKINTANFQFLFNLGLRMNLARKKHRATDNAAQHGIELGTKIPTINTNYYSLLGTTLQYRRLYSVYLNYVFAY |
| 4G3A Chain:A ((5-231)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPSDLDGFIQQMPKADMRVKVQLAEDLVTFLS------DDTNSIVCTDMGFLIDGLMPWL-TGSHFKIAQKSLEAFSELIKRLGSDFNAYTATVLPHVIDRLGDSRDTVRE-KAQLLLRDLMEHRVLPPQALIDKLATSCFKHKNAKVREEFLQTIVNALHEYGTQQLSVRVYIPPVCALLGDPTVNVREAAIQTLVEIYKHVGDRLRPDLRRMDDVPASKLAMLEQKFDQVKLE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4G3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -589 for 1611 contacts (-0.4/contact) +
2D Compatibility (PS) -22665 + (NN) -3611 + (LL) 23116
1D Compatibility (HY) -10400 + (ID) 1400
Total energy: -15549.0 ( -9.65 by residue)
QMean score : 0.347
|
|
|