Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------M-IKFVRNVVL------FILTAIFLAFMLLVSYCMPH-YS-------------VAVISGVEVKRMNENENTPNNKEVKTLARDVY-FVQTYDPKD------QKSVTVYRNEDTRFGFPF-YFKFNSADISALAQSLVNQQVE-VQYYGWRINLFNM----------------FPNVIFLKPLKESDEMSKPV------FSWIL----YALLLVGF---FI-SARSVCT-LFKGKAH------------------- |
4RWR Chain:A ((55-323)) | VYREKQKKVESLPMEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTDQVYKSKEELKKQWGNNYENNLKKIEEAVSKTAGQVLTYEGKPISASFFSTSNGRTENAADYWGNDYPYLKSVDSPWDQASPKFTSEQIFTVADFQKRLGVKVLADGKVGDIKGRTEGKRVKDVAFQGKTLTGRDVRDKLELRSSDFTWKQEGDKIVVTTKGFGHGVGMSQYGANGMAAEGKKYTDIVAHYYKGVEIKTMNDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100225 for 1107 contacts (-90.5/contact) +
2D Compatibility (PS) -17909 + (NN) 1966 + (LL) 0
1D Compatibility (HY) 400 + (ID) 1650
Total energy: -117418.0 ( -106.07 by residue)
QMean score : 0.143
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